Open, Free Scientific Tools
We write the software we wished we had at the bench, and we share it.
CrystalPilot
- Released
- Free
- Open source
Crystallographic data processing and analysis: a browser interface for XDS. It follows the processing from the images to a merged data set, and builds Table 1 along the way. Its work modes, from Tutorial to Expert, also make it a platform for learning.
- An intuitive and comprehensive interface for X-ray data processing
- Various modes, for easy learning or expert use
- Everything is visual and a click away
Try the interactive pipeline Source code of CrystalPilot
Cite CrystalPilot: doi.org/10.5281/zenodo.22756729
MadY
- Released
- Free
- Open source
A scientific graphing and statistics desktop application: a fully editable vector document model with a validated statistics engine, built to run entirely offline. No account needed.
- Over 50 fully editable graph types
- 49 analyses: complete, guided statistical analysis package
- Great look, publication-ready multi-panel figures
Cite MadY: doi.org/10.5281/zenodo.23178166
In development
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Contigu
A visualization-first sequence viewer for plasmids, genes, genomes and sequencing results.
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Ama
An open scientific figure editor, with vector export.